SHARAKU: an algorithm for aligning and clustering read mapping profiles of deep sequencing in non-coding RNA processing

Motivation: Deep sequencing of the transcripts of regulatory non-coding RNA generates footprints of post-transcriptional processes. After obtaining sequence reads, the short reads are mapped to a reference genome, and specific mapping patterns can be detected called read mapping profiles, which are...

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Detalles Bibliográficos
Publicado en:Bioinformatics
Autores principales: Tsuchiya, Mariko, Amano, Kojiro, Abe, Masaya, Seki, Misato, Hase, Sumitaka, Sato, Kengo, Sakakibara, Yasubumi
Formato: Artigo
Lenguaje:Inglês
Publicado: Oxford University Press 2016
Materias:
Ismb 2016 Proceedings July 8 to July 12, 2016, Orlando, Florida
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4908357/
https://ncbi.nlm.nih.gov/pubmed/27307639
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw273
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