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SHARAKU: an algorithm for aligning and clustering read mapping profiles of deep sequencing in non-coding RNA processing

Motivation: Deep sequencing of the transcripts of regulatory non-coding RNA generates footprints of post-transcriptional processes. After obtaining sequence reads, the short reads are mapped to a reference genome, and specific mapping patterns can be detected called read mapping profiles, which are...

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Bibliografski detalji
Izdano u:Bioinformatics
Glavni autori: Tsuchiya, Mariko, Amano, Kojiro, Abe, Masaya, Seki, Misato, Hase, Sumitaka, Sato, Kengo, Sakakibara, Yasubumi
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2016
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4908357/
https://ncbi.nlm.nih.gov/pubmed/27307639
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw273
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