Pepper: cytoscape app for protein complex expansion using protein–protein interaction networks

We introduce Pepper (Protein complex Expansion using Protein–Protein intERactions), a Cytoscape app designed to identify protein complexes as densely connected subnetworks from seed lists of proteins derived from proteomic studies. Pepper identifies connected subgraph by using multi-objective optimi...

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Bibliographic Details
Published in:Bioinformatics
Main Authors: Winterhalter, C., Nicolle, R., Louis, A., To, C., Radvanyi, F., Elati, M.
Format: Artigo
Language:Inglês
Published: Oxford University Press 2014
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Applications Notes
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4816032/
https://ncbi.nlm.nih.gov/pubmed/25138169
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btu517
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