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16Stimator: statistical estimation of ribosomal gene copy numbers from draft genome assemblies

The 16S rRNA gene (16S) is an accepted marker of bacterial taxonomic diversity, even though differences in copy number obscure the relationship between amplicon and organismal abundances. Ancestral state reconstruction methods can predict 16S copy numbers through comparisons with closely related ref...

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Foilsithe in:ISME J
Main Authors: Perisin, Matthew, Vetter, Madlen, Gilbert, Jack A, Bergelson, Joy
Formáid: Artigo
Teanga:Inglês
Foilsithe: Nature Publishing Group 2016
Ábhair:
Rochtain Ar Líne:https://ncbi.nlm.nih.gov/pmc/articles/PMC4796925/
https://ncbi.nlm.nih.gov/pubmed/26359911
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/ismej.2015.161
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