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Systematic evaluation of the impact of ChIP-seq read designs on genome coverage, peak identification, and allele-specific binding detection

BACKGROUND: Chromatin immunoprecipitation followed by sequencing (ChIP-seq) experiments revolutionized genome-wide profiling of transcription factors and histone modifications. Although maturing sequencing technologies allow these experiments to be carried out with short (36–50 bps), long (75–100 bp...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Zhang, Qi, Zeng, Xin, Younkin, Sam, Kawli, Trupti, Snyder, Michael P., Keleş, Sündüz
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4765064/
https://ncbi.nlm.nih.gov/pubmed/26908256
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-0957-1
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