Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima

Gene and whole-genome duplications are widespread in plant nuclear genomes, resulting in sequence heterogeneity. Identification of duplicated genes may be particularly challenging in highly redundant genomes, especially when there are no diploid parents as a reference. Here, we developed a pipeline...

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Dettagli Bibliografici
Pubblicato in:G3 (Bethesda)
Autori principali: Boutte, Julien, Aliaga, Benoît, Lima, Oscar, Ferreira de Carvalho, Julie, Ainouche, Abdelkader, Macas, Jiri, Rousseau-Gueutin, Mathieu, Coriton, Olivier, Ainouche, Malika, Salmon, Armel
Natura: Artigo
Lingua:Inglês
Pubblicazione: Genetics Society of America 2015
Soggetti:
Investigations
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4704722/
https://ncbi.nlm.nih.gov/pubmed/26530424
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1534/g3.115.023242
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