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Halvade: scalable sequence analysis with MapReduce
Motivation: Post-sequencing DNA analysis typically consists of read mapping followed by variant calling. Especially for whole genome sequencing, this computational step is very time-consuming, even when using multithreading on a multi-core machine. Results: We present Halvade, a framework that enabl...
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| Publié dans: | Bioinformatics |
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| Auteurs principaux: | , , , , |
| Format: | Artigo |
| Langue: | Inglês |
| Publié: |
Oxford University Press
2015
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| Sujets: | |
| Accès en ligne: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4514927/ https://ncbi.nlm.nih.gov/pubmed/25819078 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btv179 |
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