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How To Deal with Multiple Binding Poses in Alchemical Relative Protein–Ligand Binding Free Energy Calculations

[Image: see text] Recent advances in improved force fields and sampling methods have made it possible for the accurate calculation of protein–ligand binding free energies. Alchemical free energy perturbation (FEP) using an explicit solvent model is one of the most rigorous methods to calculate relat...

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Pubblicato in:J Chem Theory Comput
Autori principali: Kaus, Joseph W., Harder, Edward, Lin, Teng, Abel, Robert, McCammon, J. Andrew, Wang, Lingle
Natura: Artigo
Lingua:Inglês
Pubblicazione: American Chemical Society 2015
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4462751/
https://ncbi.nlm.nih.gov/pubmed/26085821
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/acs.jctc.5b00214
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