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Hybrid De Novo Genome Assembly Using MiSeq and SOLiD Short Read Data

A hybrid de novo assembly pipeline was constructed to utilize both MiSeq and SOLiD short read data in combination in the assembly. The short read data were converted to a standard format of the pipeline, and were supplied to the pipeline components such as ABySS and SOAPdenovo. The assembly pipeline...

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Détails bibliographiques
Publié dans:PLoS One
Auteurs principaux: Ikegami, Tsutomu, Inatsugi, Toyohiro, Kojima, Isao, Umemura, Myco, Hagiwara, Hiroko, Machida, Masayuki, Asai, Kiyoshi
Format: Artigo
Langue:Inglês
Publié: Public Library of Science 2015
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC4412624/
https://ncbi.nlm.nih.gov/pubmed/25919614
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0126289
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