Using RNA-Seq to assemble a rose transcriptome with more than 13,000 full-length expressed genes and to develop the WagRhSNP 68k Axiom SNP array for rose (Rosa L.)

In order to develop a versatile and large SNP array for rose, we set out to mine ESTs from diverse sets of rose germplasm. For this RNA-Seq libraries containing about 700 million reads were generated from tetraploid cut and garden roses using Illumina paired-end sequencing, and from diploid Rosa mul...

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Bibliographische Detailangaben
Veröffentlicht in:Front Plant Sci
Hauptverfasser: Koning-Boucoiran, Carole F. S., Esselink, G. Danny, Vukosavljev, Mirjana, van 't Westende, Wendy P. C., Gitonga, Virginia W., Krens, Frans A., Voorrips, Roeland E., van de Weg, W. Eric, Schulz, Dietmar, Debener, Thomas, Maliepaard, Chris, Arens, Paul, Smulders, Marinus J. M.
Format: Artigo
Sprache:Inglês
Veröffentlicht: Frontiers Media S.A. 2015
Schlagworte:
Plant Science
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4404716/
https://ncbi.nlm.nih.gov/pubmed/25954285
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fpls.2015.00249
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