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Binding hotspots on K-Ras: consensus ligand binding sites and other reactive regions from probe-based molecular dynamics analysis

We have used probe-based molecular dynamics (pMD) simulations to search for interaction hotspots on the surface of the therapeutically highly relevant oncogenic K-Ras G12D. Combining the probe-based query with an ensemble-based pocket identification scheme and an analysis of existing Ras-ligand comp...

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Détails bibliographiques
Publié dans:Proteins
Auteurs principaux: Prakash, Priyanka, Hancock, John F., Gorfe, Alemayehu A.
Format: Artigo
Langue:Inglês
Publié: 2015
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC4400267/
https://ncbi.nlm.nih.gov/pubmed/25740554
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/prot.24786
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