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A Dynamic Programming Algorithm for Finding the Optimal Segmentation of an RNA Sequence in Secondary Structure Predictions

In this paper, we present a dynamic programming algorithm that runs in polynomial time and allows us to achieve the optimal, non-overlapping segmentation of a long RNA sequence into segments (chunks). The secondary structure of each chunk is predicted independently, then combined with the structures...

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Dades bibliogràfiques
Publicat a:2nd Int Conf Bioinform Comput Biol (2010)
Autors principals: Licon, Abel, Taufer, Michela, Leung, Ming-Ying, Johnson, Kyle L.
Format: Artigo
Idioma:Inglês
Publicat: 2010
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4335647/
https://ncbi.nlm.nih.gov/pubmed/25705724
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