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HyDA-Vista: towards optimal guided selection of k-mer size for sequence assembly

MOTIVATION: Intimately tied to assembly quality is the complexity of the de Bruijn graph built by the assembler. Thus, there have been many paradigms developed to decrease the complexity of the de Bruijn graph. One obvious combinatorial paradigm for this is to allow the value of k to vary; having a...

Täydet tiedot

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Bibliografiset tiedot
Julkaisussa:BMC Genomics
Päätekijät: Shariat, Basir, Movahedi, Narjes Sadat, Chitsaz, Hamidreza, Boucher, Christina
Aineistotyyppi: Artigo
Kieli:Inglês
Julkaistu: BioMed Central 2014
Aiheet:
Linkit:https://ncbi.nlm.nih.gov/pmc/articles/PMC4304221/
https://ncbi.nlm.nih.gov/pubmed/25558875
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-15-S10-S9
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