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Identification of mutations in laboratory evolved microbes from next-generation sequencing data using breseq

Next-generation DNA sequencing (NGS) can be used to reconstruct eco-evolutionary population dynamics and to identify the genetic basis of adaptation in laboratory evolution experiments. Here, we describe how to run the open-source breseq computational pipeline to identify and annotate genetic differ...

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Detalhes bibliográficos
Publicado no:Methods Mol Biol
Main Authors: Deatherage, Daniel E., Barrick, Jeffrey E.
Formato: Artigo
Idioma:Inglês
Publicado em: 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4239701/
https://ncbi.nlm.nih.gov/pubmed/24838886
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1007/978-1-4939-0554-6_12
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