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Gene order alignment on trees with multiOrthoAlign

We relate the comparison of gene orders to an alignment problem. Our evolutionary model accounts for both rearrangement and content-modifying events. We present a heuristic based on dynamic programming for the inference of the median of three genomes and apply it in a phylogenetic framework. multiOr...

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Detalhes bibliográficos
Publicado no:BMC Genomics
Main Authors: Benzaid, Billel, El-Mabrouk, Nadia
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4239680/
https://ncbi.nlm.nih.gov/pubmed/25572278
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-15-S6-S5
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