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Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology
Orthology inference and other sequence analyses across multiple genomes typically start by performing exhaustive pairwise sequence comparisons, a process referred to as “all-against-all”. As this process scales quadratically in terms of the number of sequences analysed, this step can become a bottle...
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| Main Authors: | , , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
PeerJ Inc.
2014
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4193403/ https://ncbi.nlm.nih.gov/pubmed/25320677 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.607 |
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