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Massively parallel read mapping on GPUs with the q-group index and PEANUT
We present the q-group index, a novel data structure for read mapping tailored towards graphics processing units (GPUs) with a small memory footprint and efficient parallel algorithms for querying and building. On top of the q-group index we introduce PEANUT, a highly parallel GPU-based read mapper....
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| Autori principali: | , |
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| Natura: | Artigo |
| Lingua: | Inglês |
| Pubblicazione: |
PeerJ Inc.
2014
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| Soggetti: | |
| Accesso online: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4184027/ https://ncbi.nlm.nih.gov/pubmed/25289191 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.606 |
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