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Asymptotic distribution of motifs in a stochastic context-free grammar model of RNA folding

We analyze the distribution of RNA secondary structures given by the Knudsen-Hein stochastic context-free grammar used in the prediction program Pfold. Our main theorem gives relations between the expected number of these motifs — independent of the grammar probabilities. These relations are a conse...

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Detalhes bibliográficos
Main Authors: Poznanović, Svetlana, Heitsch, Christine E.
Formato: Artigo
Idioma:Inglês
Publicado em: 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4081518/
https://ncbi.nlm.nih.gov/pubmed/24384698
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1007/s00285-013-0750-y
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