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KAnalyze: a fast versatile pipelined K-mer toolkit

Motivation: Converting nucleotide sequences into short overlapping fragments of uniform length, k-mers, is a common step in many bioinformatics applications. While existing software packages count k-mers, few are optimized for speed, offer an application programming interface (API), a graphical inte...

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Bibliographic Details
Main Authors: Audano, Peter, Vannberg, Fredrik
Format: Artigo
Language:Inglês
Published: Oxford University Press 2014
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4080738/
https://ncbi.nlm.nih.gov/pubmed/24642064
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btu152
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