A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

Unbiased next-generation sequencing (NGS) approaches enable comprehensive pathogen detection in the clinical microbiology laboratory and have numerous applications for public health surveillance, outbreak investigation, and the diagnosis of infectious diseases. However, practical deployment of the t...

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Detalhes bibliográficos
Main Authors: Naccache, Samia N., Federman, Scot, Veeraraghavan, Narayanan, Zaharia, Matei, Lee, Deanna, Samayoa, Erik, Bouquet, Jerome, Greninger, Alexander L., Luk, Ka-Cheung, Enge, Barryett, Wadford, Debra A., Messenger, Sharon L., Genrich, Gillian L., Pellegrino, Kristen, Grard, Gilda, Leroy, Eric, Schneider, Bradley S., Fair, Joseph N., Martínez, Miguel A., Isa, Pavel, Crump, John A., DeRisi, Joseph L., Sittler, Taylor, Hackett, John, Miller, Steve, Chiu, Charles Y.
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2014
Assuntos:
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Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4079973/
https://ncbi.nlm.nih.gov/pubmed/24899342
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.171934.113
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