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De novo Semi-alignment of 16S rRNA Gene Sequences for Deep Phylogenetic Characterization of Next Generation Sequencing Data

We addressed the challenges of analyzing next-generation 16S rRNA gene deep sequencing data from the uncharacterized microbial majority. This was performed using a novel de novo semi-alignment approach. The semi-alignments were based on Orthologous Tri-Nucleotides (OTNs), which are identical trinucl...

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Detalhes bibliográficos
Main Authors: Avershina, Ekaterina, Frisli, Trine, Rudi, Knut
Formato: Artigo
Idioma:Inglês
Publicado em: Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4070667/
https://ncbi.nlm.nih.gov/pubmed/23603801
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1264/jsme2.ME12157
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