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PARma: identification of microRNA target sites in AGO-PAR-CLIP data

PARma is a complete data analysis software for AGO-PAR-CLIP experiments to identify target sites of microRNAs as well as the microRNA binding to these sites. It integrates specific characteristics of the experiments into a generative model. The model and a novel pattern discovery tool are iterativel...

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Bibliographic Details
Main Authors: Erhard, Florian, Dölken, Lars, Jaskiewicz, Lukasz, Zimmer, Ralf
Format: Artigo
Language:Inglês
Published: BioMed Central 2013
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4054675/
https://ncbi.nlm.nih.gov/pubmed/23895117
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-7-r79
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