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Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations

Simulation of in vivo cellular processes with the reaction-diffusion master equation (RDME) is a computationally expensive task. Our previous software enabled simulation of inhomogeneous biochemical systems for small bacteria over long time scales using the MPD-RDME method on a single GPU. Simulatio...

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Detalhes bibliográficos
Main Authors: Hallock, Michael J., Stone, John E., Roberts, Elijah, Fry, Corey, Luthey-Schulten, Zaida
Formato: Artigo
Idioma:Inglês
Publicado em: 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4039640/
https://ncbi.nlm.nih.gov/pubmed/24882911
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.parco.2014.03.009
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