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An optimal algorithm for computing all subtree repeats in trees

Given a labelled tree T, our goal is to group repeating subtrees of T into equivalence classes with respect to their topologies and the node labels. We present an explicit, simple and time-optimal algorithm for solving this problem for unrooted unordered labelled trees and show that the running time...

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Detalhes bibliográficos
Main Authors: Flouri, T., Kobert, K., Pissis, S. P., Stamatakis, A.
Formato: Artigo
Idioma:Inglês
Publicado em: The Royal Society Publishing 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3996578/
https://ncbi.nlm.nih.gov/pubmed/24751873
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1098/rsta.2013.0140
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