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Accelerating Virtual High-Throughput Ligand Docking: current technology and case study on a petascale supercomputer

In this paper we give the current state of high-throughput virtual screening. We describe a case study of using a task-parallel MPI (Message Passing Interface) version of Autodock4 [1], [2] to run a virtual high-throughput screen of one-million compounds on the Jaguar Cray XK6 Supercomputer at Oak R...

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Detalhes bibliográficos
Main Authors: Ellingson, Sally R., Dakshanamurthy, Sivanesan, Brown, Milton, Smith, Jeremy C., Baudry, Jerome
Formato: Artigo
Idioma:Inglês
Publicado em: 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3979631/
https://ncbi.nlm.nih.gov/pubmed/24729746
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/cpe.3070
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