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Ensemble MD simulations restrained via crystallographic data: Accurate structure leads to accurate dynamics

Currently, the best existing molecular dynamics (MD) force fields cannot accurately reproduce the global free-energy minimum which realizes the experimental protein structure. As a result, long MD trajectories tend to drift away from the starting coordinates (e.g., crystallographic structures). To a...

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Detalhes bibliográficos
Main Authors: Xue, Yi, Skrynnikov, Nikolai R
Formato: Artigo
Idioma:Inglês
Publicado em: Wiley-Blackwell 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3970899/
https://ncbi.nlm.nih.gov/pubmed/24452989
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/pro.2433
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