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Alignment-free Visualization of Metagenomic Data by Nonlinear Dimension Reduction

The visualization of metagenomic data, especially without prior taxonomic identification of reconstructed genomic fragments, is a challenging problem in computational biology. An ideal visualization method should, among others, enable clear distinction of congruent groups of sequences of closely rel...

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Bibliografiske detaljer
Main Authors: Laczny, Cedric C., Pinel, Nicolás, Vlassis, Nikos, Wilmes, Paul
Format: Artigo
Sprog:Inglês
Udgivet: Nature Publishing Group 2014
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3970189/
https://ncbi.nlm.nih.gov/pubmed/24682077
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/srep04516
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