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Combining Transcriptome Assemblies from Multiple De Novo Assemblers in the Allo-Tetraploid Plant Nicotiana benthamiana

BACKGROUND: Nicotiana benthamiana is an allo-tetraploid plant, which can be challenging for de novo transcriptome assemblies due to homeologous and duplicated gene copies. Transcripts generated from such genes can be distinct yet highly similar in sequence, with markedly differing expression levels....

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Détails bibliographiques
Auteurs principaux: Nakasugi, Kenlee, Crowhurst, Ross, Bally, Julia, Waterhouse, Peter
Format: Artigo
Langue:Inglês
Publié: Public Library of Science 2014
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3948916/
https://ncbi.nlm.nih.gov/pubmed/24614631
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0091776
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