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Importance of collection in gene set enrichment analysis of drug response in cancer cell lines

Gene set enrichment analysis (GSEA) associates gene sets and phenotypes, its use is predicated on the choice of a pre-defined collection of sets. The defacto standard implementation of GSEA provides seven collections yet there are no guidelines for the choice of collections and the impact of such ch...

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Bibliografische gegevens
Hoofdauteurs: Bateman, Alain R., El-Hachem, Nehme, Beck, Andrew H., Aerts, Hugo J. W. L., Haibe-Kains, Benjamin
Formaat: Artigo
Taal:Inglês
Gepubliceerd in: Nature Publishing Group 2014
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Online toegang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3923229/
https://ncbi.nlm.nih.gov/pubmed/24522610
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/srep04092
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