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Sorting genomes with rearrangements and segmental duplications through trajectory graphs

We study the problem of sorting genomes under an evolutionary model that includes genomic rearrangements and segmental duplications. We propose an iterative algorithm to improve any initial evolutionary trajectory between two genomes in terms of parsimony. Our algorithm is based on a new graphical m...

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Detalhes bibliográficos
Main Authors: Shao, Mingfu, Lin, Yu, Moret, Bernard
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3851842/
https://ncbi.nlm.nih.gov/pubmed/24564345
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-14-S15-S9
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