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A Geometric Interpretation for Local Alignment-Free Sequence Comparison

Local alignment-free sequence comparison arises in the context of identifying similar segments of sequences that may not be alignable in the traditional sense. We propose a randomized approximation algorithm that is both accurate and efficient. We show that under D(2) and its important variant [Form...

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Autors principals: Behnam, Ehsan, Waterman, Michael S., Smith, Andrew D.
Format: Artigo
Idioma:Inglês
Publicat: Mary Ann Liebert, Inc. 2013
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC3704055/
https://ncbi.nlm.nih.gov/pubmed/23829649
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2012.0280
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