A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w(1118); iso-2; iso-3

We describe a new computer program, SnpEff, for rapidly categorizing the effects of variants in genome sequences. Once a genome is sequenced, SnpEff annotates variants based on their genomic locations and predicts coding effects. Annotated genomic locations include intronic, untranslated region, ups...

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Bibliographic Details
Main Authors: Cingolani, Pablo, Platts, Adrian, Wang, Le Lily, Coon, Melissa, Nguyen, Tung, Wang, Luan, Land, Susan J., Lu, Xiangyi, Ruden, Douglas M.
Format: Artigo
Language:Inglês
Published: Landes Bioscience 2012
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Research Paper
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC3679285/
https://ncbi.nlm.nih.gov/pubmed/22728672
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.4161/fly.19695
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