A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly

BACKGROUND: The lack of genomic resources can present challenges for studies of non-model organisms. Transcriptome sequencing offers an attractive method to gather information about genes and gene expression without the need for a reference genome. However, it is unclear what sequencing depth is ade...

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Bibliographic Details
Main Authors:	Francis, Warren R, Christianson, Lynne M, Kiko, Rainer, Powers, Meghan L, Shaner, Nathan C, D Haddock, Steven H
Format:	Artigo
Language:	Inglês
Published:	BioMed Central 2013
Subjects:	Research Article
Online Access:	https://ncbi.nlm.nih.gov/pmc/articles/PMC3655071/ https://ncbi.nlm.nih.gov/pubmed/23496952 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-14-167
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A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly

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