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PASTA: splice junction identification from RNA-Sequencing data

BACKGROUND: Next generation transcriptome sequencing (RNA-Seq) is emerging as a powerful experimental tool for the study of alternative splicing and its regulation, but requires ad-hoc analysis methods and tools. PASTA (Patterned Alignments for Splicing and Transcriptome Analysis) is a splice juncti...

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Hlavní autoři: Tang, Shaojun, Riva, Alberto
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2013
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3623791/
https://ncbi.nlm.nih.gov/pubmed/23557086
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-14-116
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