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CLASS: constrained transcript assembly of RNA-seq reads

BACKGROUND: RNA-seq has revolutionized our ability to survey the cellular transcriptome in great detail. However, while several approaches have been developed, the problem of assembling the short reads into full-length transcripts remains challenging. RESULTS: We developed a novel algorithm and soft...

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Autors principals: Song, Li, Florea, Liliana
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2013
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC3622639/
https://ncbi.nlm.nih.gov/pubmed/23734605
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-14-S5-S14
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