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Composition-based classification of short metagenomic sequences elucidates the landscapes of taxonomic and functional enrichment of microorganisms

Compared with traditional algorithms for long metagenomic sequence classification, characterizing microorganisms’ taxonomic and functional abundance based on tens of millions of very short reads are much more challenging. We describe an efficient composition and phylogeny-based algorithm [Metagenome...

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Bibliografski detalji
Glavni autori: Liu, Jiemeng, Wang, Haifeng, Yang, Hongxing, Zhang, Yizhe, Wang, Jinfeng, Zhao, Fangqing, Qi, Ji
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2013
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3592448/
https://ncbi.nlm.nih.gov/pubmed/22941634
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gks828
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