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Improved variation calling via an iterative backbone remapping and local assembly method for bacterial genomes

Sequencing data analysis remains limiting and problematic, especially for low complexity repeat sequences and transposon elements due to inherent sequencing errors and short sequence read lengths. We have developed a program, ReviSeq, which uses a hybrid method comprised of iterative remapping and l...

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Bibliographische Detailangaben
Hauptverfasser: Tae, Hongseok, Settlage, Robert E., Shallom, Shamira, Bavarva, Jasmin H., Preston, Dale, Hawkins, Gregory N., Adams, L. Garry, Garner, Harold R.
Format: Artigo
Sprache:Inglês
Veröffentlicht: 2012
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3483379/
https://ncbi.nlm.nih.gov/pubmed/22967795
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.ygeno.2012.07.015
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