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Evaluation of Different Reference Based Annotation Strategies Using RNA-Seq – A Case Study in Drososphila pseudoobscura

RNA-Seq is a powerful tool for the annotation of genomes, in particular for the identification of isoforms and UTRs. Nevertheless, several software tools exist and no standard strategy to obtain a reliable annotation is yet established. We tested different combinations of the most commonly used refe...

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Bibliographische Detailangaben
Hauptverfasser: Palmieri, Nicola, Nolte, Viola, Suvorov, Anton, Kosiol, Carolin, Schlötterer, Christian
Format: Artigo
Sprache:Inglês
Veröffentlicht: Public Library of Science 2012
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3463616/
https://ncbi.nlm.nih.gov/pubmed/23056304
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0046415
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