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Improving the efficiency of dot-matrix similarity searches through use of an oligomer table.

Dot-matrix sequence similarity searches can be greatly speeded up through use of a table listing all locations of short oligomers in one of the sequences to find potential similarities with a second sequence. The algorithm described finds similarities between two sequences of lengths M and N, compar...

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Autore principale: Fristensky, B
Natura: Artigo
Lingua:Inglês
Pubblicazione: 1986
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC339447/
https://ncbi.nlm.nih.gov/pubmed/3753792
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