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BRAT-BW: efficient and accurate mapping of bisulfite-treated reads
Summary: We introduce BRAT-BW, a fast, accurate and memory-efficient tool that maps bisulfite-treated short reads (BS-seq) to a reference genome using the FM-index (Burrows–Wheeler transform). BRAT-BW is significantly more memory efficient and faster on longer reads than current state-of-the-art too...
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| Main Authors: | , , , |
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| 格式: | Artigo |
| 語言: | Inglês |
| 出版: |
Oxford University Press
2012
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| 主題: | |
| 在線閱讀: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3381974/ https://ncbi.nlm.nih.gov/pubmed/22563065 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/bts264 |
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