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PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences

BACKGROUND: Periodic spacing of short adenine or thymine runs phased with DNA helical period of ~10.5 bp is associated with intrinsic DNA curvature and deformability, which play important roles in DNA-protein interactions and in the organization of chromosomes in both eukaryotes and prokaryotes. Loc...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Mrázek, Jan, Chaudhari, Tejas, Basu, Aryabrata
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2011
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3372288/
https://ncbi.nlm.nih.gov/pubmed/22587738
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/2042-5783-1-13
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