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GraphClust: alignment-free structural clustering of local RNA secondary structures

Motivation: Clustering according to sequence–structure similarity has now become a generally accepted scheme for ncRNA annotation. Its application to complete genomic sequences as well as whole transcriptomes is therefore desirable but hindered by extremely high computational costs. Results: We pres...

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Sonraí Bibleagrafaíochta
Main Authors: Heyne, Steffen, Costa, Fabrizio, Rose, Dominic, Backofen, Rolf
Formáid: Artigo
Teanga:Inglês
Foilsithe: Oxford University Press 2012
Ábhair:
Rochtain Ar Líne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3371856/
https://ncbi.nlm.nih.gov/pubmed/22689765
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/bts224
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