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Multi-Strand RNA Secondary Structure Prediction and Nanostructure Design including Pseudoknots

We are presenting NanoFolder, a method for the prediction of the base pairing of potentially pseudoknotted multi-strand RNA nanostructures. We show that the method outperforms several other structure prediction methods when applied to RNA complexes with non-nested base pairs. We extended this second...

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Detalhes bibliográficos
Main Authors: Bindewald, Eckart, Afonin, Kirill, Jaeger, Luc, Shapiro, Bruce A.
Formato: Artigo
Idioma:Inglês
Publicado em: 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3263976/
https://ncbi.nlm.nih.gov/pubmed/22067111
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/nn202666w
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