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The Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles

One of the main challenges for protein redesign is the efficient evaluation of a combinatorial number of candidate structures. The modeling of protein flexibility, typically by using a rotamer library of commonly-observed low-energy side-chain conformations, further increases the complexity of the r...

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Main Authors: Georgiev, Ivelin, Lilien, Ryan H., Donald, Bruce R.
Formato: Artigo
Idioma:Inglês
Publicado em: 2008
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3263346/
https://ncbi.nlm.nih.gov/pubmed/18293294
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/jcc.20909
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