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EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data

Recovery of ribosomal small subunit genes by assembly of short read community DNA sequence data generally fails, making taxonomic characterization difficult. Here, we solve this problem with a novel iterative method, based on the expectation maximization algorithm, that reconstructs full-length smal...

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Autori principali: Miller, Christopher S, Baker, Brett J, Thomas, Brian C, Singer, Steven W, Banfield, Jillian F
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2011
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC3219967/
https://ncbi.nlm.nih.gov/pubmed/21595876
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2011-12-5-r44
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