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SEAL: a distributed short read mapping and duplicate removal tool

Summary: SEAL is a scalable tool for short read pair mapping and duplicate removal. It computes mappings that are consistent with those produced by BWA and removes duplicates according to the same criteria employed by Picard MarkDuplicates. On a 16-node Hadoop cluster, it is capable of processing ab...

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Detalhes bibliográficos
Main Authors: Pireddu, Luca, Leo, Simone, Zanetti, Gianluigi
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3137215/
https://ncbi.nlm.nih.gov/pubmed/21697132
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btr325
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