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PeakRanger: A cloud-enabled peak caller for ChIP-seq data

BACKGROUND: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorithms to call peaks from ChIP-seq datasets, most are tuned either to handle punctate sites, such as transcriptional factor b...

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Detalhes bibliográficos
Main Authors: Feng, Xin, Grossman, Robert, Stein, Lincoln
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3103446/
https://ncbi.nlm.nih.gov/pubmed/21554709
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-12-139
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