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pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

BACKGROUND: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-based phylogenetic methods cannot be applied to large volumes of short reads from next-generation sequencing due to computa...

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Библиографические подробности
Главные авторы: Matsen, Frederick A, Kodner, Robin B, Armbrust, E Virginia
Формат: Artigo
Язык:Inglês
Опубликовано: BioMed Central 2010
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Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC3098090/
https://ncbi.nlm.nih.gov/pubmed/21034504
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-11-538
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