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Protein sequence redundancy reduction: comparison of various method

Non-redundant protein datasets are of utmost importance in bioinformatics. Constructing such datasets means removing protein sequences that overreach certain similarity thresholds. Several programs such as ‘Decrease redundancy’, ‘cd-hit’, ‘Pisces’, ‘BlastClust’ and ‘SkipRedundant’ are available. The...

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Bibliographic Details
Main Authors: Sikic, Kresimir, Carugo, Oliviero
Format: Artigo
Language:Inglês
Published: Biomedical Informatics 2010
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC3055704/
https://ncbi.nlm.nih.gov/pubmed/21364823
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