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Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup

Summary: The top-scoring pair (TSP) and top-scoring triplet (TST) algorithms are powerful methods for classification from expression data, but analysis of all combinations across thousands of human transcriptome samples is computationally intensive, and has not yet been achieved for TST. Implementat...

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Detalhes bibliográficos
Main Authors: Magis, Andrew T., Earls, John C., Ko, Youn-Hee, Eddy, James A., Price, Nathan D.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3051334/
https://ncbi.nlm.nih.gov/pubmed/21257608
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btr033
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