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Standard operating procedure for computing pangenome trees
We present the pan-genome tree as a tool for visualizing similarities and differences between closely related microbial genomes within a species or genus. Distance between genomes is computed as a weighted relative Manhattan distance based on gene family presence/absence. The weights can be chosen w...
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| Main Authors: | , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
Michigan State University
2010
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| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3035256/ https://ncbi.nlm.nih.gov/pubmed/21304685 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.4056/sigs.38923 |
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